AT1G09050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1); Has 552 Blast hits to 499 proteins in 115 species: Archae - 0; Bacteria - 86; Metazoa - 259; Fungi - 14; Plants - 77; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2918031..2920858 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 102374.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.64 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.70 | ||||||||||||||||||||||||
| Length | 916 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLLMDGENN LMEETTAVIE EDSYDDEFPC GDPQVEPRVG DEFQVDIPLM MSASKRAVFL SNPVALDDST CSFLVGLPVQ VMWIDKVGIG QGNGDGNVDM 101: NQSLKSLRAK KGRCSAKIRG KSDKNSETKK QRLNLEAVPA IPSSSWDDLE VASFVLGLYT FGKNFTQMNN FMENKGIGEI MLFYYGKFYN SAKYHTWSES 201: RKKRNRKCVY GRKLYSGWRQ QQLLTRLMPS IPDEPQKQML VDVSKSFAEG TITLEKYVSA VKNLVGLRLL VDAVAIGKEK EDLTVPTSTP MKTKPWFTVS 301: SKSSLVPGEG DYNSLTSAGI INQLTGCSRL SKARCNDIFW GAVWPRLLAR GWRSQQPEDR GYFKSKDYIV FIVPGVKKFS RQELVKGDHY FDSVSDILTK 401: VVSEPELLEN ETGGVAAENP SDQSDEESSP SDSLRHRYLR SPCSNRGTLG MKFTVVDTSL ATGGKLCDLR NLNAECLVVS EPKARLEAKD SSVLKNSLDS 501: QNVEKSQVRP LDAKNHVDDP MRFTIVDTSV DHCEKLSGFR RWRCLPSDDT RRGHVGADSG IKEEKTLEKA KDPSKRVIKP RSTPRAETNY YAVDSAPYLK 601: RRRLSACISR ESPVSKHLPG DNDTKMTICL ESEQQSICVV QQQTSTCEEM NQDKEIVPLV EHMNLKSDQS KKTGTGLSSS LVEIQETTAI EPSGLNSNTG 701: VDKNCSPEKI RTAHELISAE PKTNGICSVS ELDKKRASSD LEQKQVFELP SISGSNNRSP SNDLGTSQEM GSSEQQHNQQ IKTDGPRRQS TRKRPLTTRA 801: LEALESDFLI TKRMKSTTKP EPRKHESSTK KKRSAKACNR NGSADLEHRG EDRSSFTKKS PTSKPLDQIE DSKPSYLLNE ARTESKALDQ VQESRPVLTE 901: YRKLPPIVLK LPFRRG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)