AT1G08150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.986 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cation/hydrogen exchanger family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATCHX5; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 2700 Blast hits to 2678 proteins in 819 species: Archae - 128; Bacteria - 1881; Metazoa - 0; Fungi - 113; Plants - 529; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2556343..2559074 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91611.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.03 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.33 | ||||||||||||||||||||||||||||||||||||
| Length | 815 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESRNEAYEG AYNATFWGDF SYHGYGFSED GSKFCEQIPI LVNSFGVWEK LDLPIRGMKI WDYSLPHLES VIVLVLCLWQ FFYLSLKKIG LPVPKITSMM 101: IAGAALSQTN LLPNDWTIQH ILFPDDTRPK VPETLGGFAF VFYWFIEGVK MDVGMVRKTG TKVIVTGIAT VILPIIAANM VFGKLRETGG KYLTGMEYRT 201: ILFMQSISAF TGISRLLRDL RINHSEFGRI VISTAMVADG TGFGVNLFAL VAWMDWRVSA LQGVGIIGYV IFMVWVVRPA MFWVIKRTPQ ERPVKECFIY 301: IILILAFGGY YFLKEIHMFP AVGPFLLGLC VPHGPPLGSQ LVEKFESFNT GILLPLFLFF SMLQIDGPWL ANQIGQLRHF DGQLYEALTI IIVVFVAKII 401: FSMIPALLAK MPLTDSFVMA LILSNKGIVE LCYFLYGVES NVLHVKSFTI MATMILVSST ISPVLIHYLY DSSKRFISFQ KRNLMSLKLG SELKFLVCIH 501: KADHISGMIN LLAQSFPLHE STISCYVIHL VELVGLDNPV FISHQMQKAE PGNRSYSNNV LIAFDNFKHY WKSISLELFT CISNPRYMHQ EIYSLALDKQ 601: ASFLMLPFHI IWSLDQTTVV SDDVMRRNAN LNVLRQAPCS VGIFVHRQKL LSAQKSSPSF EVCAIFVGGK DDREALALGR QMMRNPNVNL TVLKLIPAKM 701: DGMTTGWDQM LDSAEVKEVL RNNNNTVGQH SFVEYVEETV NDGSDTSTLL LSIANSFDLF VVGRSAGVGT DVVSALSEWT EFDELGVIGD LLVSQDFPRR 801: GSVLVVQQQQ NVACR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)