AT1G04600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin XI A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Myosin-like proteins | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:1262123..1272376 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 196132.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.25 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1730 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAASAKVTVG SHVWVEDPDD AWIDGEVEEV NSEEITVNCS GKTVVAKLNN VYPKDPEFPE LGVDDMTKLA YLHEPGVLLN LKCRYNANEI YTYTGNILIA 0101: VNPFKRLPHL YGSETMKQYK GTAFGELSPH PFAVADSAYR KMINEGVSQA ILVSGESGAG KTESTKMLMQ YLAYMGGRAE SEGRSVEQQV LESNPVLEAF 0201: GNAKTVRNNN SSRFGKFVEI QFDQRGRISG AAIRTYLLER SRVCQVSDPE RNYHCFYMLC AAPEQETERY KLGKPSTFRY LNQSNCYALD GLDDSKEYLA 0301: TRKAMDVVGI NSEEQDGIFR VVAAILHLGN IEFAKGEESE ASEPKDEKSR FHLKVAAELF MCDGKALEDS LCKRVMVTRD ESITKSLDPD SAALGRDALA 0401: KIVYSKLFDW LVTKINNSIG QDPNSKHIIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FNQHVFKMEQ EEYTKEEIDW SYIEFIDNQD VLDLIEKKPG 0501: GIIALLDEAC MFPRSTHDTF AQKLYQTFKN HKRFGKPKLA QTDFTICHYA GDVTYQTELF LDKNKDYVVG EHQALLSSSD CSFVSSLFPP LPEESSKTSK 0601: FSSIGSQFKQ QLQSLLESLS TTEPHYIRCV KPNNLLKPDI FENINILHQL RCGGVMEAIR ISCAGYPTRK PFNEFLTRFR ILAPETTKSS YDEVDACKKL 0701: LAKVDLKGFQ IGKTKVFLRA GQMAEMDAHR AEVLGHSARI IQRNVLTYQS RKKFLLLQAA STEIQALCRG QVARVWFETM RREAASLRIQ KQARTYICQN 0801: AYKTLCSSAC SIQTGMRAKA ARIELQLRKK RRATIIIQSQ IRRCLCHQRY VRTKKAAITT QCGWRVKVAR RELRNLKMAA KETGALQDAK TKLENQVEEL 0901: TSNLELEKQM RMEIEEAKSQ EIEALQSVLT DIKLQLRDTQ ETKSKEISDL QSVLTDIKLQ LRDTQETKSK EISDLQSALQ DMQLEIEELS KGLEMTNDLA 1001: AENEQLKESV SSLQNKIDES ERKYEEISKI SEERIKDEVP VIDQSAIIKL ETENQKLKAL VSSMEEKIDE LDRKHDETSP NITEKLKEDV SFDYEIVSNL 1101: EAENERLKAL VGSLEKKINE SGNNSTDEQE EGKYILKEES LTEDASIDNE RVKKLADENK DLNDLVSSLE KKIDETEKKY EEASRLCEER LKQALDAETG 1201: LIDLKTSMQR LEEKVSDMET AEQIRRQQAL VNSASRRMSP QVSFTGAPPL ENGHQEPLAP IPSRRFGTES FRRSRIERQP HEFVDVLLKC VSKNIGFSHG 1301: KPVAALTIYK CLMRWKIFEA EKTSIFDRIV PVFGSAIENQ EDDNHLAYWL TNTSTLLFLL QRSLRQQSST GSSPTKPPQP TSFFGRMTQG FRSTSSPNLS 1401: TDVVQQVDAR YPALLFKQQL TAYVETMYGI IRENVKREVS SLLSSCIQSL KESSCDSSVV NSPSKSSEEN LPAKSSEENS PKKSSEENSP KESSGDKSPQ 1501: KLSDDNSPSK EGQAVKSSEE NSPASSWQSI IEFLNYILIT WKKNYVPLFL VQKMFSQTFQ YINVQLFNSL LLEREYCTVN MGIKVKAGLD ELESWCSQAT 1601: EEFVGSSWDE LKHTRQAVVL LVTEPKSTIT YDDLTINLCS VLSTEQLYRI CTLCKDKDDG DHNVSPEVIS NLKLLLTNED ENSRSFLLDD DSSIPFDTDE 1701: ISSCMQEKDF ANVKSASELA DNPNFLFLKE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)