AT5G43590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.592 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17509368..17511477 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45395.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.09 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||
| Length | 401 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFKNNKPPKY GNLVTILSLD GGGVRGIIGG VILANLEKHL QEIDNDESVR LADYFDVIAG TSTGGLMTAM LTAPNDSGRP LYAAKDIVPF YLEESPKIFY 101: GSKWWDPSAL WALFRPKYNG EYLHTRLGEI LGETKLDQTL TNVVIPTFDI KKLQPTIFSS YHASVDPSLN AKLSDICIGT SAAPFYLPPY KFPENDKMRT 201: FNLIDGGVTA NDPTLVGMTA MSRKSIIKHP DMDGFKPLEY EKYIVISIGT GSAKREEYYS AVEAAKWGFE NWAYNWKHKT TPILDIIFES SRDMVQYHTS 301: VLFQALESED NYLRIDADTL KKDEVFMDDS ETLNLENLKN IGEKLLDTNV MRMNLDTYTY EPIPKTVNND QELKRFAKIL SDEKKLRNKT FKTMIDDSSN 401: S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)