AT5G38450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 735, subfamily A, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP709A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 735, subfamily A, polypeptide 1 (CYP735A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 2 (TAIR:AT1G67110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:15394000..15397233 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58904.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.89 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 518 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLTILKSLL VIFVTTILRV LYDTISCYWL TPRRIKKIME QQGVTGPKPR PLTGNILEIS AMVSQSASKD CDSIHHDIVG RLLPHYVAWS KQYGKRFIVW 101: NGTDPRLCLT ETELIKELLM KHNGVSGRSW LQQQGTKNFI GRGLLMANGQ DWHHQRHLAA PAFTGERLKG YARHMVECTS KLVERLRKEV GEGANEVEIG 201: EEMHKLTADI ISRTKFGSSF EKGKELFNHL TVLQRRCAQA TRHLCFPGSR FLPSKYNREI KSLKKEVERL LIEIIQSRRD CAEMGRSSTH GDDLLGLLLN 301: EMDIDKNNNN NNNNLQLIMD ECKTFFFAGH ETTALLLTWT TMLLADNPTW QEKVREEVRE VFGRNGLPSV DQLSKLTSLS KVINESLRLY PPATLLPRMA 401: FEDLKLGDLT IPKGLSIWIP VLAIHHSEEL WGKDANQFNP ERFGGRPFAS GRHFIPFAAG PRNCIGQQFA LMEAKIILAT LISKFNFTIS KNYRHAPIVV 501: LTIKPKYGVQ VILKPLVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)