AT5G22910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.532 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cation/H+ exchanger 9 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cation/H+ exchanger 9 (CHX9); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 10 (TAIR:AT3G44930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:7660927..7663829 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 89065.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.91 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.36 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 800 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTDSQALVPG PSPPHSKAEI CYGATFFNIS SYGIMEKYET PTVIFGYALP LLELQIILIF VCIVLSHMFL RRIGIPRFVS NILAGLILGP QLLDLLEYSS 101: DRLSLDIPGN VALEGVARLG LVMFTFLMGV KTNKRAVYQI GKRPIVIAVS SFFVTMISGL AFRNFRLDKV DPLYMPLRLA PTERSVIVSI QAVTLLPVIT 201: HLVYELKMSN SELGRIAIST AAVSDFLGFL TLVCISYVGT YRYVSPGIAN RDIVALIILV LVILFIFKPM AQRIVDMTPE GKPVPKVYLY VTILTAIAAS 301: IYLSVFNQMY ILGALLVGLA IPDGPPLGSA LEARFESLVT NIFFPISIAV MAMKADVVRA LYSFDDISFN ILLLGLTVVV KWTASFVPCL IFCELPTRES 401: VIIATIMNYK GFVDLCFFDV ALRRRNLSRA TYTVMIIYVL LNAGILPTII KALYDPKRKY IGYVKRDIMH LKTNSDLKIL TCLHKPDNIS GAISLLELLS 501: SPLNNDNKDR GVIAVTALHL VKLAGRTFPI LIPHDKRSKA RLLQNSYIQT MMLAFTEFQQ ENWESTTVSS FTAYSHENLM DQDICNLALD HLTSMIIVPS 601: GRKWSPDGEY ESDDIMIRRV NESLLDLAPC SVGILNYRGY NKGKKKTNSI INVGVIFIGG KDDREALSLA KWMGQNSRVC LTVIRFLSGQ ELDKSKNWDY 701: LVDDEVLNDL KATYSLANNF NYMEKVVNGG PAVATTVRLV AEDHDLMIVG RDHEDYSLDL TGLAQWMELP ELGVIGDLLA SKDLRARVSV LVVQQQQQHG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)