AT4G29710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.833 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Alkaline-phosphatase-like family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Alkaline-phosphatase-like family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29700.1); Has 956 Blast hits to 954 proteins in 215 species: Archae - 0; Bacteria - 150; Metazoa - 543; Fungi - 112; Plants - 97; Viruses - 6; Other Eukaryotes - 48 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:14547001..14547402 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 15036.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.39 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||
| Length | 133 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNEALSSGKV KNGEFLTVYL KEKLPDRLHY SQSYRIPPII GMVGEGLIVR QNRTNAQECY GDHGYDNKFF SMRTIFVGHG SRFRRGKKVP SFENVQIYSV 101: VADILGLRPA PNNGSSLFPR SILLPFRATR GLE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)