AT3G57970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.960 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: ENT (InterPro:IPR005491), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT3G57960.1); Has 108 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21465226..21466677 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35791.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.72 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||
| Length | 319 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNGDGFSSDL DSVEEESTDI PIKNTETVPS YKGDDDILFS PLDKKVKLSM LQDRAYYYVL HAFKAESPAI SSSRIVIMQE LLKELKIEYK THQTYHNAIE 101: ADPMVLQLRN VSLASDEKEM QKLTVAEEPE ITGVDGQPLI IRIKLNKDDN AKIQDRVLAP AKIKDGKVLA PAKIQDEEAK PSSTSDDSPD SSWGQVSPGS 201: LVGRRVHIQM PDEDEYIEFL ITKYDANTET HHLLSAFSNK DYEDPCNWVD LRHVQAEDMK WPEGDPDLPV WKCSPKPGET LFHETSTTQN KKQVHEVGKT 301: STGIPVIRKV DKGKAVVDA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)