suba logo
AT3G54270.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.847
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sucrose-6F-phosphate phosphohydrolase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process, metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose-phosphate phosphatase (InterPro:IPR006378), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847); BEST Arabidopsis thaliana protein match is: Sucrose-6F-phosphate phosphohydrolase family protein (TAIR:AT2G35840.3); Has 735 Blast hits to 727 proteins in 269 species: Archae - 13; Bacteria - 485; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G54270-MONOMEREC:3.1.3.24eggNOG:COG0561eggNOG:ENOG410JS53
EMBL:AF434711EMBL:AL132957EMBL:CP002686EnsemblPlants:AT3G54270
EnsemblPlants:AT3G54270.1entrez:824594Gene3D:3.40.50.1000GeneID:824594
Genevisible:Q93WU4GO:GO:0000287GO:GO:0005986GO:GO:0050307
Gramene:AT3G54270.1gramene_pathway:3.1.3.24gramene_pathway:PWYQT-4467gramene_pathway:SUCSYN-PWY
gramene_plant_reactome:1119465gramene_plant_reactome:6876290hmmpanther:PTHR12526hmmpanther:PTHR12526:SF2
HOGENOM:HOG000272726InParanoid:Q93WU4InterPro:IPR006379InterPro:IPR006380
InterPro:IPR012847InterPro:IPR013679InterPro:IPR023214InterPro:IPR032710
KEGG:00500+3.1.3.24KEGG:ath:AT3G54270OMA:ASERCGAPaxDb:Q93WU4
Pfam:PF05116Pfam:PF08472Pfam:Q93WU4PhylomeDB:Q93WU4
PIR:T47586PRIDE:Q93WU4PRO:PR:Q93WU4ProteinModelPortal:Q93WU4
Proteomes:UP000006548RefSeq:NP_190995.2SMR:Q93WU4STRING:3702.AT3G54270.1
SUPFAM:SSF54427SUPFAM:SSF56784TAIR:AT3G54270TIGRfam:TIGR01482
TIGRfam:TIGR01484TIGRfam:TIGR01485TIGRFAMs:TIGR01484TIGRFAMs:TIGR01485
UniGene:At.27489UniPathway:UPA00371UniProt:Q93WU4
Coordinates (TAIR10) chr3:-:20087419..20089735
Molecular Weight (calculated) 48646.20 Da
IEP (calculated) 4.84
GRAVY (calculated) -0.50
Length 425 amino acids
Sequence (TAIR10)
(BLAST)
001: MDRLEGPPRL ILVADLDCTL VDHDDPENND LLRFNALWEA HYRHDSLLVY CTGRSFSSYS SLRKKRPLLT PDIAVTSVGS EIVYGGGEST VSDVVWTARL
101: DYKWNRDIVV EETLKFPKLE PQPDKSQEEH KVSFFVGRED AVEIMKVLPG ILEERGVDVK LVYSNGYAFD VLPRGAGKQG ALTYLLDKLD IEGKQPSNTL
201: VCGDSGNDAE LFNISDVYGV MVSNSHEELL QWYEENAKDN PKIFHASERC GAGMIEAIQR FNLGPNVSPR DVMDTENFHG ESLNPAHEVV QFYLFYERWR
301: CGEVEKSDKY LQNLKSLSSP LGIFVHPSGV EKPIHEWIDE MENLYGDGKE KKFRIWLDNV TSSHISSDTW LAKFVKHELS EGKVRSCSTK VLLSYKEEKQ
401: RLTWMHIHQS WLDESSSDDQ EKWIF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)