AT3G54270.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.847 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : sucrose-6F-phosphate phosphohydrolase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process, metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose-phosphate phosphatase (InterPro:IPR006378), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847); BEST Arabidopsis thaliana protein match is: Sucrose-6F-phosphate phosphohydrolase family protein (TAIR:AT2G35840.3); Has 735 Blast hits to 727 proteins in 269 species: Archae - 13; Bacteria - 485; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:20087419..20089735 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 48646.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.84 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 425 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDRLEGPPRL ILVADLDCTL VDHDDPENND LLRFNALWEA HYRHDSLLVY CTGRSFSSYS SLRKKRPLLT PDIAVTSVGS EIVYGGGEST VSDVVWTARL 101: DYKWNRDIVV EETLKFPKLE PQPDKSQEEH KVSFFVGRED AVEIMKVLPG ILEERGVDVK LVYSNGYAFD VLPRGAGKQG ALTYLLDKLD IEGKQPSNTL 201: VCGDSGNDAE LFNISDVYGV MVSNSHEELL QWYEENAKDN PKIFHASERC GAGMIEAIQR FNLGPNVSPR DVMDTENFHG ESLNPAHEVV QFYLFYERWR 301: CGEVEKSDKY LQNLKSLSSP LGIFVHPSGV EKPIHEWIDE MENLYGDGKE KKFRIWLDNV TSSHISSDTW LAKFVKHELS EGKVRSCSTK VLLSYKEEKQ 401: RLTWMHIHQS WLDESSSDDQ EKWIF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)