AT3G18180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.487 endoplasmic reticulum 0.267 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyltransferase family 61 protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G18170.1); Has 763 Blast hits to 763 proteins in 164 species: Archae - 0; Bacteria - 23; Metazoa - 306; Fungi - 8; Plants - 399; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:6230270..6231878 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53190.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.36 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||
| Length | 470 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTKKDILYDT VLARSFSKTD QKRLCCGAFI ASLLLVLTLC TVVKPYLSPL PIVELQLSVG TGLRMLSITE LTTNTTISKE EVISECNKME KPICHCNTLG 101: SKEFCDVSGD VRIHGKSATV LAAVTFAFSG NSTWYMRPYA RKDQVPAMKR VREWTVKLVQ NASLSRCVRN HSVPAILFSL GGFSLNNFHD FTDIVIPLYT 201: TARRFSGEVQ FLVTNKNLLW INKFKELVRK LSNYEVIYID EEDETHCFSS VIVGLNRHRD YDKELTTDPS NSEYSMSDFR KFLRDTYSLR NSAVTTRRKP 301: RILILSRSRS RAFVNAGEIA RAARQIGFKV VVAEANTEIA SFAITVNSCD VMLGVHGAGM TNMVFLPDNA IVIQILPIGG FEWLAKMDFE YPSKGMNLRY 401: LEYKITAEES TLVKQYGRDH EFVRDPLAVA KRGWGTFKSV YLVQQNVSVD INRFKLVLVK ALELLHNQSV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)