AT2G45610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.888 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45600.1); Has 6944 Blast hits to 6930 proteins in 1305 species: Archae - 101; Bacteria - 4054; Metazoa - 322; Fungi - 575; Plants - 1325; Viruses - 3; Other Eukaryotes - 564 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18791463..18792437 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36020.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.50 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 324 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRDSPPAFD PYKHLNITIN PNGSCTRHFV WPRVEPDPDP CPGKLAASKD VTINHETGVS VRIFRPTNLP SNDNAVARLP IIIHLHGSGW ILYPANSAAN 101: DRCCSQMASE LTVIVVSVHY RLPPEHRLPA QYDDALDALL WVKQQVVDST NGEPWLKDYA DFSRCYICGS SNGANIAFQL ALRSLDHDLT PLQIDGCVFY 201: QPLFGGKTRT KSELKNFADP VMPVPAVDAM WELSLPVGVD RDHRYCNPLG YLPQKEKVGR LGRCLVIGYG GDTSLDRQQD FVNLLVAAGV RVEARFDDAG 301: FHSIELVDPR RAVALLNMIR DFIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)