AT1G32300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.854 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : D-arabinono-1,4-lactone oxidase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 2573 Blast hits to 2542 proteins in 768 species: Archae - 19; Bacteria - 1742; Metazoa - 82; Fungi - 220; Plants - 254; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:11651342..11653365 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65951.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 595 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFWLSLIFF CFCTFASSTP PDDPVKCESG NNMCTVTNSY GAFPDRSICE AAKVEYPKTE AELVSIVAAA TRAGQKVRVV TRYVHSIPKL VCTDGKDGVL 101: ISTKFLNNVV GTNPEAKTLT VESGVTLRQL IGEAAELELA LPHAPYWWGL TVGGLMGTGA HGSSLWGKGS AVHDYVSEIR MVSPGLASDG YVKVRVLSET 201: IDPDEFRAAK VSLGVLGVIS QVTFQLQPMF KRSLTFVMQN DSDFGDQAVT FGEKHEFADF LWLPSQGKVV YRMDDRVPVN TSGNGLFDFF PFRPQLSVAL 301: AIIRSLEESE ESSGDANDKC ARAEQITSFL FSISYGVTNN GMEFTGYPVI GKQNHMMSSG TCLDSHQDGL ITSCPWDPRI KGQFFHQTAF SIPLTRVKGF 401: INDIKALVKI EPKSLCALER SNGILIRYVT SSPAFLGKEE KALDFDLTYY RSKDDPLAPR LYEDFIEEIE QMAIFKYNAL PHWGKNRNLA FDGVIRKYKN 501: ANTFLKVKER FDPLGLFSTE WTNQILGLKG NVTIVKEGCA LEGLCVCSDD AHCAPKKGYL CRPGKVYTKA RVCTHVKSVN GYDDHTKFNL MFNRI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)