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ATMG01410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : open reading frame 204
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
open reading frame 204 (ORF204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, mitoviral (InterPro:IPR008686); BEST Arabidopsis thaliana protein match is: Mitovirus RNA-dependent RNA polymerase (TAIR:ATMG01110.1).
Protein Annotations
eggNOG:ENOG410J4MSeggNOG:ENOG410YZGZEMBL:Y08501EnsemblPlants:ATMG01410
EnsemblPlants:ATMG01410.1entrez:4024966GeneID:4024966Genevisible:P92567
GO:GO:0005739Gramene:ATMG01410.1hmmpanther:PTHR34456hmmpanther:PTHR34456:SF3
InParanoid:P92567InterPro:IPR008686KEGG:ath:ArthMp112OMA:IFPRESG
PaxDb:P92567Pfam:P92567Pfam:PF05919PRIDE:P92567
PRO:PR:P92567Proteomes:UP000006548RefSeq:NP_085590.1SUPFAM:SSF56672
TAIR:ATMG01410tair10-symbols:ORF204UniProt:P92567
Coordinates (TAIR10) chrM:-:366086..366700
Molecular Weight (calculated) 22815.70 Da
IEP (calculated) 9.96
GRAVY (calculated) 0.21
Length 204 amino acids
Sequence (TAIR10)
(BLAST)
001: MFGGRRRRLP QDGTFNQTQP FDRLVGSRHS FSFDLKSATD RWPLVFLFEV VQYLFDRSFA SSVVNSAFAC NIFEVPFVKL KRRFSQVCFV AGQPLGYHGS
101: WPTFALSHHI LVWWCAKQVH PGVRFTSYAV LGDDVVIADQ EVAKVYESAL GGLGVKISYQ KSLIPIQVLL SLLNASGLGN LVLKREIFPR ESGVLSLMSV
201: PSLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)