ATMG01410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : open reading frame 204 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
open reading frame 204 (ORF204); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, mitoviral (InterPro:IPR008686); BEST Arabidopsis thaliana protein match is: Mitovirus RNA-dependent RNA polymerase (TAIR:ATMG01110.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chrM:-:366086..366700 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 22815.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.96 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.21 | ||||||||||||||||||||||||||||
| Length | 204 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFGGRRRRLP QDGTFNQTQP FDRLVGSRHS FSFDLKSATD RWPLVFLFEV VQYLFDRSFA SSVVNSAFAC NIFEVPFVKL KRRFSQVCFV AGQPLGYHGS 101: WPTFALSHHI LVWWCAKQVH PGVRFTSYAV LGDDVVIADQ EVAKVYESAL GGLGVKISYQ KSLIPIQVLL SLLNASGLGN LVLKREIFPR ESGVLSLMSV 201: PSLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)