ATMG00160.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome oxidase 2 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
cytochrome c oxidase subunit 2 | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome oxidase 2 (COX2); FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: mitochondrion, chloroplast, mitochondrial respiratory chain complex IV; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome C oxidase subunit II-like, transmembrane domain (InterPro:IPR015964), Cytochrome c oxidase subunit II C-terminal (InterPro:IPR002429), Cupredoxin (InterPro:IPR008972), Cytochrome c oxidase, subunit II (InterPro:IPR014222), Cytochrome C oxidase subunit II, transmembrane domain (InterPro:IPR011759); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase subunit II-like, transmembrane domain (TAIR:ATMG01280.1). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chrM:-:40502..42628 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 29377.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.51 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.23 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 260 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MIVLKWLFLT ISPCDAAEPW QLGSQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA LWHFHYKKNA IPQRIVHGTT IEILRTIFPS IISMFIAIPS 101: FALLYSMDEV VVDPAITIKA IGHQWYRTYE YSDYNSSDEQ SLTFDSYMIP EEDLELGQSR LLEVDNRVVV PAKTHLRIIV TSADVPHSWA VPSSGVKCDA 201: VPGRLNQISI LVQREGVYYG QCSEICGTNH AFTSIVVEAV PRKDYGSRVS NQLIPQTGEA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)