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ATCG00770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30865669 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23673981 (2013): plastid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23549413 (2013): plastid plastid stroma
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : ribosomal protein S8
Curator
Summary (TAIR10)		 chloroplast 30S ribosomal protein S8
Computational
Description (TAIR10)		 ribosomal protein S8 (RPS8); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630).
Protein Annotations
eggNOG:COG0096eggNOG:KOG1754EMBL:AP000423EnsemblPlants:ATCG00770
EnsemblPlants:ATCG00770.1entrez:844724GeneID:844724Genevisible:P56801
GO:GO:0003735GO:GO:0005840GO:GO:0006412GO:GO:0009507
GO:GO:0019843Gramene:ATCG00770.1HAMAP:MF_01302_Bhmmpanther:PTHR11758
HOGENOM:HOG000204095InParanoid:P56801InterPro:IPR000630KEGG:ath:ArthCp058
KO:K02994OMA:HRRNKKEPANTHER:PTHR11758PaxDb:P56801
Pfam:P56801Pfam:PF00410PRIDE:P56801PRO:PR:P56801
PROSITE:PS00053ProteinModelPortal:P56801Proteomes:UP000006548RefSeq:NP_051093.1
scanprosite:PS00053SMR:P56801STRING:3702.ATCG00770.1SUPFAM:SSF56047
TAIR:ATCG00770tair10-symbols:RPS8UniProt:P56801
Coordinates (TAIR10) chrC:-:80068..80472
Molecular Weight (calculated) 15480.20 Da
IEP (calculated) 11.52
GRAVY (calculated) -0.34
Length 134 amino acids
Sequence (TAIR10)
(BLAST) 		001: MGKDTIADII TSIRNADMNR KGTVRIGSTN ITESIVKILL REGFIENVRK HRENNQYFLI LTLRHRRNKK ESYKTILNLK RISRPGLRIY SNSQRIPRIL
101: GGIGIVILST SQGIMTDREA RLKRIGGEIL CYIW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)