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ATCG00590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : electron carriers
Curator
Summary (TAIR10)
hypothetical protein
Computational
Description (TAIR10)
electron carriers; FUNCTIONS IN: electron carrier activity; LOCATED IN: endomembrane system, cytochrome b6f complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b6/f complex subunit VI (InterPro:IPR007802).
Protein Annotations
EMBL:AJ971685EMBL:AJ971686EMBL:AP000423EnsemblPlants:ATCG00590
EnsemblPlants:ATCG00590.1entrez:844744GeneID:844744Genevisible:P56776
GO:GO:0009512GO:GO:0009535GO:GO:0015979GO:GO:0016021
GO:GO:0045158GO:GO:0055114Gramene:ATCG00590.1HAMAP:MF_00433
hmmpanther:PTHR37266hmmpanther:PTHR37266:SF1InParanoid:P56776InterPro:IPR007802
KEGG:ath:ArthCp040PaxDb:P56776Pfam:P56776Pfam:PF05115
PRO:PR:P56776Proteomes:UP000006548RefSeq:NP_051077.1STRING:3702.ATCG00590.1
TAIR:ATCG00590tair10-symbols:ORF31TMHMM:TMhelixUniProt:P56776
Coordinates (TAIR10) chrC:+:65712..65807
Molecular Weight (calculated) 3401.42 Da
IEP (calculated) 10.45
GRAVY (calculated) 1.49
Length 31 amino acids
Sequence (TAIR10)
(BLAST)
1: MPTITSYFGF LLAALTITSV LFIGLSKIRL I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)