ATCG00560.1::SUBA5

ATCG00560.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plastid 1.000
What is SUBAcon?

Predictors

External Curations

SwissProt : plastid 16381842
TAIR : plastid 15322131
TAIR : plastid 14729914

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31975158 (2020): plastid PMID:31932409 (2020): plastid PMID:31615849 (2019): plastid plastid thylakoid PMID:30962257 (2019): plastid PMID:30865669 (2019): plastid PMID:29967049 (2018): plastid PMID:28865150 (2017): extracellular region plant-type cell wall PMID:27943495 (2017): mitochondrion PMID:27137770 (2016): plastid plastid stroma PMID:24872594 (2014): plastid plastid thylakoid PMID:23851315 (2013): plastid PMID:23673981 (2013): plastid plastid stroma plastoglobules PMID:23667806 (2013): plastid plastid thylakoid PMID:20061580 (2010): plastid plastid thylakoid PMID:18633119 (2008): plastid plastid thylakoid PMID:15322131 (2004): plastid PMID:14729914 (2004): plastid	PMID:22616989 (2012): AT1G68830.1:None: PMID:22616989 (2012): AT4G05180.1:None: PMID:22616989 (2012): ATCG00270.1:None: PMID:22616989 (2012): ATCG00020.1:None: PMID:22616989 (2012): AT4G01150.1:None: PMID:22616989 (2012): AT3G46780.1:None: PMID:22616989 (2012): ATCG00280.1:None: PMID:22616989 (2012): AT4G22890.1:None: PMID:22616989 (2012): AT2G46820.1:None: PMID:22616989 (2012): AT2G28800.1:None: PMID:22616989 (2012): AT5G01530.1:None: PMID:22616989 (2012): AT3G08940.1:None: PMID:22616989 (2012): AT3G47070.1:None: PMID:22616989 (2012): AT3G19900.1:None: PMID:22616989 (2012): AT2G39730.1:None: PMID:22616989 (2012): AT3G52230.1:None: PMID:22616989 (2012): ATCG00710.1:None: PMID:22616989 (2012): AT3G63160.1:None: PMID:22616989 (2012): AT5G23060.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
no coexpression data	AT3G63160.1 plastid ATCG00710.1 plastid ATCG00280.1 plastid ATCG00270.1 plastid ATCG00020.1 plastid AT5G23060.1 plastid AT5G01530.1 plastid AT4G22890.1 plastid AT4G05180.1 plastid AT4G01150.1 plastid AT1G68830.1 plastid AT3G52230.1 plastid AT3G47070.1 plastid AT3G46780.1 plastid AT3G19900.1 plastid AT3G08940.1 plastid AT2G46820.1 plastid AT2G39730.1 plastid AT2G28800.1 plastid

Description (TAIR10)

protein_coding : photosystem II reaction center protein L

Curator
Summary (TAIR10)

PSII L protein

Computational
Description (TAIR10)

photosystem II reaction center protein L (PSBL); INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbL (InterPro:IPR003372).

Protein Annotations

eggNOG:ENOG410J8NQ	eggNOG:ENOG410XVDD	EMBL:AP000423	EMBL:AY007473
EnsemblPlants:ATCG00560	EnsemblPlants:ATCG00560.1	entrez:844751	GeneID:844751
Genevisible:P60129	GO:GO:0009535	GO:GO:0009539	GO:GO:0015979
GO:GO:0016021	Gramene:ATCG00560.1	HAMAP:MF_01317	hmmpanther:PTHR33391
hmmpanther:PTHR33391:SF5	HOGENOM:HOG000091309	InParanoid:P60129	IntAct:P60129
InterPro:IPR003372	KEGG:ath:ArthCp037	KO:K02713	MINT:MINT-8360532
PaxDb:P60129	Pfam:P60129	Pfam:PF02419	PRIDE:P60129
PRO:PR:P60129	ProDom:PD005113	ProteinModelPortal:P60129	Proteomes:UP000006548
RefSeq:NP_051074.1	SMR:P60129	STRING:3702.ATCG00560.1	SUPFAM:0053717
TAIR:ATCG00560	tair10-symbols:PSBL	TMHMM:TMhelix	UniProt:P60129

Coordinates (TAIR10)

chrC:-:63804..63920

Molecular Weight (calculated)

4470.37 Da

IEP (calculated)

4.26

GRAVY (calculated)

0.33

Length

38 amino acids

Sequence (TAIR10)
(BLAST)

1: MTQSNPNEQS VELNRTSLYW GLLLIFVLAV LFSNYFFN