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AT5G66720.2
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.682
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G66720EnsemblPlants:AT5G66720.2entrez:836805hmmpanther:PTHR12320
hmmpanther:PTHR12320:SF16Pfam:PF13672Pfscan:PS51746
Coordinates (TAIR10) chr5:-:26639015..26640545
Molecular Weight (calculated) 43519.20 Da
IEP (calculated) 7.50
GRAVY (calculated) -0.18
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MSATALSRLN PVSQFGFQRI VAGKSKSFFS NSGQRRLFSD SSRFRQAMAA SGSLPVFGDA CLDDLVTTCS NGLDFTKKRS SGGSFTINCP VASMRLGKRG
101: GMMKNRLVCH YSVVDPLEKS RALFGTLSKS VHTSPMACFS VGPAHELSSL NGGSQESPPT TTTSLKLVSG SCYLPHPEKE ATGGEDAHFI CDEEQAIGVA
201: DGVGGWAEVG VNAGLFSREL MSYSVSAIQE QHKGSSIDPL VVLEKAHSQT KAKGSSTACI IVLKDKGLHA INLGDSGFTV VREGTTVFQS PVQQHGFNFT
301: YQLESGNSAD VPSSGQVFTI DVQSGDVIVA GTDGVYDNLY NEEITGVVVS SVRAGLDPKG TAQKIAELAR QRAVDKKRQS PFATAAQEAG YRYYGGKLDD
401: ITAVVSYVTS S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)