AT5G65500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.662 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : U-box domain-containing protein kinase family protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1); Has 41004 Blast hits to 40348 proteins in 1429 species: Archae - 75; Bacteria - 1512; Metazoa - 10519; Fungi - 737; Plants - 24654; Viruses - 146; Other Eukaryotes - 3361 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:26181093..26183997 | ||||||||||||
| Molecular Weight (calculated) | 90331.30 Da | ||||||||||||
| IEP (calculated) | 7.19 | ||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||
| Length | 791 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEETKTHELE VEAESGSRME KVYIAVGNDV QEGYKTIHWA LKKWNNIPIS IVLLHLCNIS QDFVYTPFGK LPASSVSEEK LQVLRKYEDQ KIDKLLSKYI 101: TFCGKVKAEL LKVEKQHDSI QVLILDLISK LRITKLVMGI TFMRSSSSWK SKSAISGSFY VYQNKPEFCE FYIICGGKMV SLKNDVNNNN SNIRSWIGKM 201: FHDPGRNLDR SSGNNDDPTA SGSSWDKNLQ EIENYFQQLL SLNLAEEETE NVVEEEQEDD DDVALNVLQH MVKILRKVNE AKLMIDEKSR EVKVNAERSN 301: RAEWAISLCN SRIGEFEAWI KEESERREKL QATLDSDKEC IEEAKNYVEK GKTKLHSLAE LQEVLSSKVK TMMEAKSQAE VELERVVLQR GEMITEIEKL 401: RSQRDVFNRR IEFCKEREVI GSVSKEEVKC GYREYVAEDI RLATETYSDR LRLKSGGNWT NVYRGRIKHT TVAVKVIGDS LSDEAFGAKV KLLNEIRHPN 501: LVAIAGFCSQ RPKCLLFEYM HNGNLRDNLF TSQRKSRRSK ILKWHDRIRI AHQVCSGLGF LHSVKPKPIV HGRLTPSKIL LDRNLVPKIT GFGLIMHSDQ 601: SDTKPDVMAF GVLLLHLLTG RNWHGLLKAM SMNQTSILRD LDQTAGKWPL ELAKEFGALA VKCSSVNRGG NMDFSTKEIM EELGKIREKA DEFKTKGGYE 701: EATNSNMDEG DPNDIPSVFM CPILQEVMKN PHVAADGFSY ELEAIQEWLS MGHDTSPMTN LRLDYQMLTP NHTLRSLIQD WHSKRAAQAS S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)