AT5G64710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Putative endonuclease or glycosyl hydrolase | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G09840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:25869368..25872092 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94059.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.28 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||
| Length | 841 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQFGSSKTLF FRVAGFSSTS VFKPRRAISV PVGNFSSSSS ISAHYTSLKR SQYEEDSRSV RVPVWWDFEN CHLPSGANVF KLAQTITSAV RICGIKGPIT 101: ITAYGDMIQL SRTNQEALFA TGINLTHVPQ GGKNSTDRSL ITEIMCWVSQ NPPPAHLFLI SSDSDFANVL HRLRMRNYNI LLACYEETTL GVLCSAASIM 201: WDWDALVRGQ NPTAKHFNQP PDGPYHSWYG HYTTPLLDPF ATSTNNKQIS STSVKTVELL ELGSSKSRRP IPNKVVKQIG LILRWYPKGA AITELREQLR 301: KRKVLLDRDF YGYKSFSRFL LSMRNILQVV PLGDGMFSIH AVTQGMDNKA LLPKVSCENH AVVSVEKMCQ NMKQNDKDVK EESHQLQESS QEFVQVMKLM 401: DVKAKEEPVK ANQLAITAVD DVSSFEEKDG FLKKLNRLLF GSPEMELEHL QERKHISGNG VLGEGKVVDK DLESQIASST SSESAEEVKV DNAVGNGKSK 501: SPGLTCRLLK RFKFSWGRYT ELSNAAATGP QVDDVFVKDS FWNDVESFIN SPRGFVAVSH SRSRETMAKN LKEEGPSSLK PLDVPKMLDL ISMLISEKKW 601: IQENPSDALP FRVTRFTEES SCRSNPRTTD GLRAIFVNMS ESLCDGANGD KNSTNVGMSQ KPKERSRSKV IADCHKLIKK ITEENAGGYS ITKFKKAFLE 701: KFGYRLEYRK FGFSKLQSLI EMMPEARIES GHIVTSSTPV PCESDSSFED LGPVSKKIHE NESSVSEGED YDSEMEEKAS SKQSGGERKK KEDETESDLL 801: QILGSWDTDK KPAKTFGEDK LVEGILMSLR KKPSGDSRIQ D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)