AT5G63720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : kokopelli | ||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes KOKOPELLI (KPL). kokopelli (kpl) mutants display frequent single-fertilization events indicating that KPL is involved in double fertilization. KPL and an inversely transcribed gene, ARIADNE14 (ARI14), which encodes a putative ubiquitin E3 ligase, generate a sperm-specific natural cis-antisense siRNA pair. In the absence of KPL, ARI14 RNA levels in sperm are increased and fertilization is impaired. | ||||||||||||||||||||
| Computational Description (TAIR10) |
KOKOPELLI (KPL); Has 4661 Blast hits to 3228 proteins in 353 species: Archae - 2; Bacteria - 1288; Metazoa - 1768; Fungi - 518; Plants - 152; Viruses - 6; Other Eukaryotes - 927 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:25506349..25508017 | ||||||||||||||||||||
| Molecular Weight (calculated) | 55953.40 Da | ||||||||||||||||||||
| IEP (calculated) | 10.07 | ||||||||||||||||||||
| GRAVY (calculated) | -1.10 | ||||||||||||||||||||
| Length | 492 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPNNVERNL QSLRRLYSLL VANARNEYIP EAYKLDDNTQ FLLKRLLDFA SHEHFVTQSN LLATQLRVFP KTVLHGAKPS NVADSSETTP PAMLSQINGS 101: HITRVSKPLE AKGTLQRDLR VDQIRSNPSK DVLTEEVVDA IEQIDTQLSA LSFVSSRVDS DERTRSVKSF VTPPTEECRQ NSQASMPCLR SNYMTVSQKS 201: VISGAEVTFP YNDQLVRVTS PPQPLPPRAV SGFKKPNQSN RASQKMPIMK PTLMDQETET FDDDSSETEA DQTPSATGSE SEDEEVSTSQ EYSGETGSSS 301: GSEWETQAEN DTESKSESSY PPQNDDSVSE VSTSPPHTDR DTSREPGKQR RNVMGRFKRI KNKIGQIFHH HHHHHHHHHH HDKEKPSAWN KLQSKFHHKH 401: QEKSKERKRP MSESKGLTTH KQQHQGGHFH ALVEGLVRHR KHSKKQKHQL KSDAKKTEWW KLLKKRQGGG VKIPKRGRVK LGKKKHYLSK NV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)