AT5G63510.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : gamma carbonic anhydrase like 1 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
gamma carbonic anhydrase like 1 (GAMMA CAL1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase-like 2 (TAIR:AT3G48680.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:25424054..25425612 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30562.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.26 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||
| Length | 279 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATSIARLSR RGVTSNLIRR CFAAEAALAR KTELPKPQFT VSPSTDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG 101: DLNKITVGFC SNVQERCVVH AAWSSPTVGC NGDKAVSHGC ELVFAPRFRQ GKFSRLPAAT IIDRYVTVGA YSLLRSCTIE PECIIGQHSI LMEGSLVETR 201: SILEAGSVVP PGRRIPSGEL WGGNPARFIR TLTNEETLEI PKLAVAINHL SGDYFSEFLP YSTVYLEVEK FKKSLGIAV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)