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AT5G63170.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G73610.1); Has 3351 Blast hits to 3312 proteins in 196 species: Archae - 0; Bacteria - 277; Metazoa - 0; Fungi - 13; Plants - 3044; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63170-MONOMEREC:3.1.1.-eggNOG:ENOG410JVZ0eggNOG:ENOG41105F8
EMBL:AB008265EMBL:CP002688EnsemblPlants:AT5G63170EnsemblPlants:AT5G63170.1
entrez:836438Gene3D:3.40.50.1110GeneID:836438GO:GO:0005576
GO:GO:0016042GO:GO:0016298Gramene:AT5G63170.1hmmpanther:PTHR22835
hmmpanther:PTHR22835:SF185HOGENOM:HOG000237650InParanoid:Q9FMK6InterPro:IPR001087
InterPro:IPR008265InterPro:IPR013830KEGG:ath:AT5G63170OMA:NIVPAYR
PaxDb:Q9FMK6Pfam:PF00657Pfam:Q9FMK6PhylomeDB:Q9FMK6
PRIDE:Q9FMK6PRO:PR:Q9FMK6PROSITE:PS01098ProteinModelPortal:Q9FMK6
Proteomes:UP000006548RefSeq:NP_201122.1scanprosite:PS01098SUPFAM:SSF52266
TAIR:AT5G63170TMHMM:TMhelixUniGene:At.55688UniProt:Q9FMK6
Coordinates (TAIR10) chr5:-:25338699..25340096
Molecular Weight (calculated) 36914.70 Da
IEP (calculated) 8.33
GRAVY (calculated) 0.16
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSLVIQTTI VLVSVISVSI VHAGNIPAVI AFGDSILDTG NNNYLMTLTK VNFYPYGRDF VTRRATGRFG NGRIPTDLIA EGLGIKNIVP AYRSPFLEPN
101: DILTGVSFAS GGSGLDPMTA RIQGVIWVPD QLNDFKAYIA KLNSITGDEE KTRSIISNAV FVISAGNNDI AITYFTNPIR NTRYTIFSYT DLMVSWTQSF
201: IKELYNLGAR KFAIMGTLPL GCLPGASNAL GGLCLEPANA VARLFNRKLA DEVNNLNSML PGSRSIYVDM YNPLLELVKN PLRSGFISPT RPCCCAPAAP
301: IPCLDASRYV FWDIAHPSEK AYQTIIPPII QQIQQSFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)