AT5G62490.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:vacuole 0.986 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : HVA22 homologue B | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
HVA22 homologue B (HVA22B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 1456 Blast hits to 1456 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 209; Plants - 491; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:25090206..25091345 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 18742.50 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.97 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.17 | ||||||||||||||||||||||||||||||||||||||||
Length | 167 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSSGIGSLVK VIFKNFDVIA GPVISLVYPL YASVRAIESR SHGDDKQWLT YWALYSLIKL FELTFFRLLE WIPLYPYAKL ALTSWLVLPG MNGAAYLYEH 101: YVRSFLLSPH TVNVWYVPAK KDDDLGATAG KFTPVNDSGA PQEKIVSSVD TSAKYVGHSA FDDAYIY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)