AT5G62470.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myb domain protein 96 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myb domain protein 96 (MYB96); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 94 (TAIR:AT3G47600.1); Has 9691 Blast hits to 8398 proteins in 583 species: Archae - 0; Bacteria - 56; Metazoa - 899; Fungi - 554; Plants - 5844; Viruses - 4; Other Eukaryotes - 2334 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25079434..25080858 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39189.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.05 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 352 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGRPPCCEKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKTIVH LQALLGNRWA AIASYLPERT 101: DNDIKNYWNT HLKKKLKKIN ESGEEDNDGV SSSNTSSQKN HQSTNKGQWE RRLQTDINMA KQALCEALSL DKPSSTLSSS SSLPTPVITQ QNIRNFSSAL 201: LDRCYDPSSS SSSTTTTTTS NTTNPYPSGV YASSAENIAR LLQDFMKDTP KALTLSSSSP VSETGPLTAA VSEEGGEGFE QSFFSFNSMD ETQNLTQETS 301: FFHDQVIKPE ITMDQDHGLI SQGSLSLFEK WLFDEQSHEM VGMALAGQEG MF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)