AT5G61550.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.839 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : U-box domain-containing protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24748325..24751805 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 96464.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 860 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEKKVVRAL SEHLSLPPPP SPSVAVAING KKKSKYVVFW ALEKFIPEGF TDFKLLYVRP PVSYIPTPMG IAVAVSELRE DVVSAYKQEL DWSANEMLRP 101: YKKMFERRKV QVEVLLLDSL EPAAAIAEEI AGTGVTKLVI GMSLRGFFSR KIDMSSLIAT AVPRFCTVYV ISKGKLASVR PSESDASGSI RFERSSSTSG 201: STDSPRLPPE YQDFLSAVSE AQSRVSPFSP ALKHSMGSNA VAQMDTSSSG TDQEEVSTGR GMEIVHSGIE GKKNKDESFS ASFPMGTEAY NSMSWTSKWR 301: DHEDRREMRS SSSSNNHDLV NMDWGAVVPE NYSWVSHTAS HMSDGLLSVH SITDNQVNLN FEIEKLRAEL KHVQEMYAMA QTETVGASKK LTELNQRRFE 401: ESEKLVELKE KEEVAKDTAS KEKQRYEEAM KEAEKVKELM MKEALHRREA EFKAERDARE KDKLQASLVS PGVQYQHYTW EEIAAATSDF AENLKIGIGA 501: YGSVYKCNLH HTTGAVKVLH AGETQLSKQF DQELEILSKI RHPHLVLLLG ACPERGCLVY EYMDNGSLDD RLMLVNDTPP IPWFERFRIA LEVASALVFL 601: HKSKPRPIIH RDLKPGNILL DHNFVSKLGD VGLSTMVNQD DVSSRTIFKQ TSPVGTLCYI DPEYQRTGII SPKSDVYSLG VVILQLITAK PAIAITHMVE 701: EAIGDDAEFM AILDKKAGSW PISDTRELAA LGLCCTEMRR RDRPDLKDQI IPALERLRKV ADKAQNLLSR TPSGPPSHFI CPLLKGVMNE PCVAADGYTY 801: DREAIEEWLR QKDTSPVTNL PLPNKNLIAN YTLYSAIMEW KSNKRLNFPK EKFLAYHPIQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)