AT5G61320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.492 endoplasmic reticulum 0.387 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 89, subfamily A, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP89A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 89, subfamily A, polypeptide 3 (CYP89A3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, cotyledon, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT2G12190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:24655098..24656638 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57742.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.84 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 497 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATWFHIFCV SFTVNFLLYL FFRRTNNNLP LPPNPNFFPM PGPFQWLRQG FDDFYSYLRS IHHRLGPIIS LRIFSVPAIF VSDRSLAHKA LVLNGAVFSD 101: RPPALPTGKI ITSNQHTISS GSYGATWRLL RRNLTSEILH PSRVKSYSNA RRSVLENLCS RIRNHGEEAK PIVVVDHLRY AMFSLLVLMC FGDKLDEEQI 201: KQVEFVQRRE LITLPRFNIL NVFPSFTKLF LRKRWEEFLT FRREHKNVLL PLIRSRRKIM IESKDSGKEY IQSYVDTLLD LELPDEKRKL NEDEIVSLCS 301: EFLNAGTDTT ATTLQWIMAN LVIGEEEEKE IEEEEMKKMP YLKAVVLEGL RLHPPGHLLL PHRVSEDTEL GGYRVPKKGT FNINVAMIGR DPTVWEEPME 401: FKPERFIGED KEVDVTGSRG IKMMPFGAGR RICPGIGSAM LHLEYFVVNL VKEFEWKEVE GYEVDLSEKW EFTVVMKYPL KALAVTRRKE KTHIVMA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)