AT5G60964.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ECA1 gametogenesis related family protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a ECA1 gametogenesis related family protein | ||||||||||||||||||||
| Computational Description (TAIR10) |
ECA1 gametogenesis related family protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: ECA1 gametogenesis related family protein (TAIR:AT5G60945.1); Has 99 Blast hits to 96 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24530586..24530924 | ||||||||||||||||||||
| Molecular Weight (calculated) | 13055.40 Da | ||||||||||||||||||||
| IEP (calculated) | 9.93 | ||||||||||||||||||||
| GRAVY (calculated) | 0.34 | ||||||||||||||||||||
| Length | 112 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSIKNVISLL MVICIIVSVN ARPPFSSIFT DPYPLLNSFP VFSRIFKCYS SVMKFPICVI ETTQSVSNRR WVISPYCCKA YLHTRDYCLP KIPYMPHFPS 101: FIRNHCLKVV RK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)