AT5G60350.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
|||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; Has 110 Blast hits to 97 proteins in 36 species: Archae - 0; Bacteria - 10; Metazoa - 39; Fungi - 2; Plants - 5; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
|
||||||||||||||||
| Coordinates (TAIR10) | chr5:+:24277872..24278861 | ||||||||||||||||
| Molecular Weight (calculated) | 32433.10 Da | ||||||||||||||||
| IEP (calculated) | 5.02 | ||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||
| Length | 291 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKITKEERR NRCLPSFGSI YRSKRTGKKE AAAAKTKVEA DLIIVKNEDK SNEEQKKIEK CWMMSEDGEG GKSTVEYDGS SILNTSGVLR GDEDISEEEP 101: EEVAEILIDK EEDSEFLITM VLDLLVEDNK SLQHKSNAAN KNSSLLDEEV ITGEGSKECD GVLSIDESLK VVETEKVDKA DEKSTVEQRL ENVDANRTQA 201: EQPTTQEQAI TIQKQNRVTR PRQPTYVPSP SARGQGYHVS AAPINMGICA PPSHPMRNDF NKVKTFDLKG VIKSSGKGLK SIAWPRRFSV K |
||||||||||||||||
| See Also |
|
||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)