AT5G60080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.946 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G60090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:24193181..24194909 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41897.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.45 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||
| Length | 377 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNRFLCCLG GGGSSKVMQD PSELPQQQQP SDSSDSSDTP GQQSEGDDEA DDEDPSSIVK FRWNDVVEGT DNFAITHLIG QGTYGKVYRC KFPEGHKVGA 101: AKIHSNGITD GLSETVAETT TLYAADHPNV IKLVGKYYGM EKSVLVYEFM PNGSLDHHLF AHARQVQGLT LPTRVLDWNT RLRIAVGVAE GLVYVHQGLY 201: AIHRDIKVEN ILLDKDFVPK LTDFGFATKI VYNSDGVERL REFNTRGTQG YIAPEADEFA LVSTKSDIYS YGVLLLVLLT GRKAYDLARP VAKEKLTDWL 301: MPVWTRLEYA PMIVDVALGN KYSIEGLNRL LQTARMCINP QALERPAMDF VETMVREAAA FPVPKEPLVK ERISTSK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)