AT5G59660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24035687..24039979 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94473.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.42 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 852 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVFLIFPWKV REDDYMKNSL GLLFLLVSII HIVRAQDQQG FISLDCGLPA NELSPYEESF TGLRFSSDEK FIRSGKNGRI RENPQGYAKP FVYGNYDGFD 101: LKPKFDLYLG PNLWATVDLQ TEVNDWGNYT ANIGFGIMGN GSYITKSGSL NLLSRTYLSK SGSDLRYMKD VYDRTWVSYG ASFRTGWTQI YTALEVNNSN 201: NYAPPKDALR NAATPTNASA PLTIEWPSGS PSQEVPGTNI TFFSDPIIPK KLDITSVQSV TPKTCQEGKC SLQLTRTNRS TLPPLLNALE IYAVIQFPQS 301: ETNEIDVIAI KKIEAMYESS RINWQGDPCV PQHFIWDGLN CSNTDISTPP RITSLNLSSS GLTGNIAAAI QNLTQLEKLD LSNNNLTGGV PEFLGNMKSL 401: SFIGNNLSGS IPQTLQKKRL ELFVEGNPRL CLSDSCRKPP KKKIHVAIVA SVASAAIVVA VLILFLILRK RKSTIVQGQH LPPSTSTVDV TFANKKSKRF 501: TYLEVIKMTN NFQRVLGKGG FGMVYHGTVK GSDQVAVKVL SQSSTQGYKQ FKAEALIYEF LPNGDLKQHL SGKGGKSIIN WSIRLQIALN AALGLEYLHI 601: GCIPPMVHRD VKTANILLDE NFKAKLADFG LSRSFQVRGE SYDSTFVAGT PGYLDPEYYP TSRLAAKSDV YSYGIVLLEM ITNQPVISEK YHITEWVGSK 701: LNRGDIIEIM DPNLGGVYDS NSAWRALELA MSCADPSSSK RPTMSQVINE LKECLVCENS RMSKTRGMEY QEMNISLDTS VVPGARYPMG QTSVCEWRQF 801: LNANQSSIAG EKVSPPGTAD DEEALFFSLD GIFRRRKPPE IIILSRRLAE AC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)