AT5G58320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.983 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinase interacting (KIP1-like) family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 43389 Blast hits to 26086 proteins in 1835 species: Archae - 761; Bacteria - 5000; Metazoa - 21918; Fungi - 3966; Plants - 2572; Viruses - 157; Other Eukaryotes - 9015 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:23577728..23579641 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60124.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.95 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||||||
| Length | 525 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDYDLLRSKK SIKRVESTKS NPWWWDSHIG LKNSKWLENN LDEMDRSVKR MVKLIEEDAD SFAKKAEMYY QSRPELIALV DEFHRMYRAL AERYENITGE 101: LRKGSPLELQ SQGSGLSDIS ASDLSALWTS NEVNRLGRPP SGRRAPGFEY FLGNGGLPSD LYHKDGDDSA SITDSELESD DSSVTNYPGY VSIGSDFQSL 201: SKRIMDLEIE LREAKERLRM QLEGNTESLL PRVKSETKFV DFPAKLAACE QELKDVNEKL QNSEDQIYIL KSQLARYLPS GLDDEQSEGA ASTQELDIET 301: LSEELRITSL RLREAEKQNG IMRKEVEKSK SDDAKLKSLQ DMLESAQKEA AAWKSKASAD KREVVKLLDR ISMLKSSLAG RDHEIRDLKT ALSDAEEKIF 401: PEKAQVKADI AKLLEEKIHR DDQFKELEAN VRYLEDERRK VNNEKIEEEE KLKSEIEVLT LEKVEKGRCI ETLSRKVSEL ESEISRLGMI RQLCFSLDYS 501: RDEYKRLRIA FSGHPPTRPS SILAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)