AT5G57690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.671 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : diacylglycerol kinase 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
diacylglycerol kinase 4 (DGK4); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 3 (TAIR:AT2G18730.1); Has 1594 Blast hits to 1405 proteins in 208 species: Archae - 0; Bacteria - 147; Metazoa - 1020; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23372063..23374469 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54184.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 487 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESPSIGDSL TARMIPRHSS LDSFGAMKVS LLVNLASIRV SKAELRQRVM LPQYLRIAIR DCILRKDDSF DASSSVAPPL ENNALTPEVP LMVFVNPKSG 101: GRQGPLIKER LQNLISEEQV YDLTEVKPNE FIRYGLGCLE AFASRGDECA KEIREKMRIV VAGGDGTVGW VLGCLGELNL QNRLPVPPVS IMPLGTGNDL 201: SRSFGWGGSF PFAWKSAIKR TLHRASVAPI SRLDSWNILI TMPSGEIVDP PYSLKATQEC YIDQNLEIEG EIPPSTNGYE GVFYNYFSIG MDAQVAYGFH 301: HLRNEKPYLA NGPIANKIIY SGYGCSQGWF LTHCINDPGL RGLKNIMTLH IKKLDSSEWE KVPVPKSVRA VVALNLHSYG SGRNPWGNLK QDYLEKRGFV 401: EAQADDGLLE IFGLKQGWHA SFVMVELISA KHIAQAAAIR LEIRGGDWKD AFMQMDGEPW KQPMTRDYST FVDIKRVPHQ SLVVKGD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)