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AT5G57400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.805
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002688EnsemblPlants:AT5G57400EnsemblPlants:AT5G57400.1entrez:835846
GeneID:835846GO:GO:0016021Gramene:AT5G57400.1KEGG:ath:AT5G57400
PaxDb:F4KAN8PRIDE:F4KAN8Proteomes:UP000006548RefSeq:NP_200550.4
TAIR:AT5G57400TMHMM:TMhelixUniGene:At.51436UniProt:F4KAN8
Coordinates (TAIR10) chr5:-:23262307..23263217
Molecular Weight (calculated) 18187.80 Da
IEP (calculated) 11.79
GRAVY (calculated) 0.09
Length 155 amino acids
Sequence (TAIR10)
(BLAST)
001: MIYARENQRS QEAHRWEFLL DCSITIIIVV SMKEFLLSGR CSREHRSTLR RKKTFVRLLL LRRFSALVSL NPQSQSSEIL INILYFRRIL SFGDGRIFER
101: DISLDGRAKA CLIKIIIMLV TVIQILVMTW RDSRGLMTTG RAHLLLRRLP RKIGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)