AT5G57170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.830 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Tautomerase/MIF superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Tautomerase/MIF superfamily protein; INVOLVED IN: inflammatory response, response to other organism; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G01650.1); Has 970 Blast hits to 970 proteins in 245 species: Archae - 0; Bacteria - 199; Metazoa - 419; Fungi - 25; Plants - 143; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23162201..23163140 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 12324.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.69 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.25 | ||||||||||||||||||||||||||||||||
| Length | 115 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPTLNLFTNI PVDAVTCSDI LKDATKAVAK IIGKPESYVM ILLNSGVPIA FAGTEEPAAY GELISIGGLG PGVNGKLSET ISEILQIKLS IDSSRFYIKF 101: YDSPRPFFGY NGSTF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)