AT5G56300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.618 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : gibberellic acid methyltransferase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
gibberellic acid methyltransferase 2 (GAMT2); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26420.1); Has 919 Blast hits to 907 proteins in 123 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:22799571..22801484 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43351.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 387 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESPSLPMTA KDWTTTSLHR VFAMQGGEDD LSYVNNSDSQ ALAITLSKPI LISSLQSIKL FSDQTPIKIT DLGCATGSNT FTTVDTVVET LQRRYTARCG 101: GGGSPEFEAF FCDLPSNDFN MLFKLLAEKQ KVDSPAKYFA GGVAGSFYDR LFPRGTIHVA VSLSALHWLS QIPEKVLEKE SRTWNKGKTW IEGAKKEVVE 201: AYAEQSDKDL DDFMSCRKEE MVKGGVLFVL MAGRPSGSSS QFGDQDTRAK HPFTTTMEQA WQDLIEEGLI DEETRDGFNI PAYMRSPEEV TAGIDRCGGF 301: KIGKMDFLKI VEYSDEKQEE WKKDPVSYGR ARTNLVQAAI RPMVDAYLGP DLSHELFKRY ENRVSTNQEF LHITCFYGVV VFSAIRV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)