AT5G51920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.822 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22980.1); Has 991 Blast hits to 937 proteins in 281 species: Archae - 6; Bacteria - 292; Metazoa - 116; Fungi - 152; Plants - 275; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:21097202..21098914 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64421.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.10 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||
| Length | 570 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHQPFPGDSS PPNCLHGCFS SSPFHGTTSS EHPPHSTPTV TSATLRRNFA QTTVSTIFPD TEFTDPNSLP SHQESFSDFI QAYPNYSDTY KIDRLRSDHY 101: FHLGLSHYTC LDYIGIGLYS YSQLLNYDPS TYQISSSLSE SPFFSVSPKI GNLKEKLLND GGQETEFEYS MKRRIMGFLK ISEEDYSMVF TANRTSAFRL 201: VAESYPFNSK RKLLTVYDYE SEAVSEINRV SEKRGAKVAA AEFSWPRLKL CSSKLRKLVT AGKNGSKTKK KGIYVFPLHS RVTGSRYPYL WMSVAQENGW 301: HVMIDACGLG PKDMDSFGLS IYNPDFMVCS FYKVFGENPS GFGCLFVKKS TISILESSTG PGMINLVPTD NPISLHALEI NRTQTDSEET YSFSSSVEYK 401: GLDHVDSLGL VATGNRSRCL INWLVSALYK LKHSTTSRLV KIYGPKVNFN RGPAVAFNLF NHKGEKIEPF IVQKLAECSN ISLGKSFLKN ILFQEDYEGV 501: KDRVFEKKRN RDVDEPRISV LTAALGFLAN FEDVYKLWIF VARFLDSEFV DKESVRCGVH VFEHKNREVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)