AT5G51800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G33550.1); Has 821 Blast hits to 813 proteins in 138 species: Archae - 2; Bacteria - 24; Metazoa - 127; Fungi - 81; Plants - 483; Viruses - 14; Other Eukaryotes - 90 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:21048317..21051906 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 108609.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.47 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||
| Length | 972 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGETTKGDAT KPPPNQISSP KDSSLDHQAP NPSLLHHHHH HHQSFLPTPI FIPTVSSPGA PVIPKRPRFS TSSGLSPPQW KALPSPSTVP TASTISSSPT 101: PSTAVVTASS TETAGSSPPG QEATNSEKQQ QPKTESFQHK FRKGKYVSPV WKPNEMLWLA RAWRAQYQTQ GTGSGSGSVE GRGKTRAEKD REVAEYLNRH 201: GINRDSKIAG TKWDNMLGEF RKVYEWEKCG DQDKYGKSYF RLSPYERKQH RLPASFDEEV YQELALFMGP RVRAPTINRG GGGGATVTVA STPPSVEALP 301: PPLYPALMTS RDEYDIENNP IPSIGRGKRL ALSLVGDDHH PQYPYAHNIA RGSGLFSNKS LYNPFFEMIP SSSSSSSSLR DLRRIGKIRL TWEESVNLWA 401: EGEVDYGRIR VSGSSFLNAD ELTYLDDSMV ACTMESFQDG PLKGFSLDKF ISGQHLKVFG RQRSTSSSAP SPSVNVAGVF DRPQLQLSEP IYKSISTLEF 501: QDPSEHCLSK LRVPAGNLPS LFELARYLQE PPPENLRFPL RPDVYKDLPQ GKELFFSISS TELLDCRAIT YDIIGPIMSR LNSNNGFVIS SKDSLIPLWD 601: DCINRMVSKF CEMAILRKPD SSSCIENVQH QWPNVIGYVK GFGLWRGEEA DKVREGAADP SSLLAEKILW SYNDLPYILG YHAIGFTVTF CALSLSSQDR 701: VICTDLYSFN VSSPSDRIKA LVPCYRLASL LPLLADRCTT RPSCYNDFER IDRGDYVTEL TPHTVTRYYS SKRKWLGVKG IYDFLDQRVP HAEHLDMASE 801: KDLSLSFKPR GIRVKPRNID QLIDSLMCVT KALLALHDLS FMHRDMGWDN VMRSTATTTT TTDTDWFVCG FDAAVEAPQL NPHRPADKVV DNEEREDERG 901: RYAPEMERGL HAVKVDVWGV GYMIKTCGLS NVPKMLRDLQ GKCLEPNQEN RPTAADCFHH LLQVQSASTS SY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)