AT5G51560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G45340.1); Has 121137 Blast hits to 67280 proteins in 2103 species: Archae - 75; Bacteria - 4844; Metazoa - 26993; Fungi - 2860; Plants - 75694; Viruses - 184; Other Eukaryotes - 10487 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:20945807..20948613 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74755.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.93 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 680 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTATQMLLHL LLLPLLFLHF SNQVMAEITD ELATLMEVKT ELDPEDKHLA SWSVNGDLCK DFEGVGCDWK GRVSNISLQG KGLSGKISPN IGKLKHLTGL 101: FLHYNALVGD IPRELGNLSE LTDLYLNVNN LSGEIPSNIG KMQGLQVLQL CYNNLTGSIP RELSSLRKLS VLALQSNKLT GAIPASLGDL SALERLDLSY 201: NHLFGSVPGK LASPPLLRVL DIRNNSLTGN VPPVLKRLNE GFSFENNLGL CGAEFSPLKS CNGTAPEEPK PYGATVFGFP SRDIPESANL RSPCNGTNCN 301: TPPKSHQGAI LIGLVVSTIA LSAISILLFT HYRRRKQKLS TTYEMSDNRL NTVGGGFRKN NGSPLASLEY TNGWDPLSDN RNLSVFAQEV IQSFRFNLEE 401: VETATQYFSE VNLLGRSNFS ATYKGILRDG SAVAIKRFSK TSCKSEEPEF LKGLNMLASL KHENLSKLRG FCCSRGRGEC FLIYDFAPNG NLLSYLDLKD 501: GDAHVLDWST RVSIAKGIAK GIAYLHSYKG SKPALVHQNI SAEKVLIDQR YSPLLSNSGL HTLLTNDIVF SALKDSAAMG YLAPEYTTTG RFTEKTDVYA 601: FGILVFQIIS GKQKVRHLVK LGTEACRFND YIDPNLQGRF FEYEATKLAR IAWLCTHESP IERPSVEAVV HELGNCSSCL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)