AT5G47280.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.985 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : ADR1-like 3 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ADR1-like 3 (ADR1-L3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:+:19193157..19195559 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70085.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.16 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||
| Length | 623 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLFNLNDEAR IIGISGMIGS GKTILAKELA RDEEVRGHFA NRVLFLTVSQ SPNLEELRSL IRDFLTGHEA GFGTALPESV GHTRKLVILD DVRTRESLDQ 101: LMFNIPGTTT LVVSQSKLVD PRTTYDVELL NEHDATSLFC LSAFNQKSVP SGFSKSLVKQ VVGESKGLPL SLKVLGASLN DRPETYWAIA VERLSRGEPV 201: DETHESKVFA QIEATLENLD PKTKECFLDM GAFPEGKKIP VDVLINMLVK IHDLEDAAAF DVLVDLANRN LLTLVKDPTF VAMGTSYYDI FVTQHDVLRD 301: VALHLTNRGK VSRRDRLLMP KRETMLPSEW ERSNDEPYNA RVVSIHTGEM TEMDWFDMDF PKAEVLIVNF SSDNYVLPPF IAKMGMLRVF VIINNGTSPA 401: HLHDFPIPTS LTNLRSLWLE RVHVPELSSS MIPLKNLHKL YLIICKINNS FDQTAIDIAQ IFPKLTDITI DYCDDLAELP STICGITSLN SISITNCPNI 501: KELPKNISKL QALQLLRLYA CPELKSLPVE ICELPRLVYV DISHCLSLSS LPEKIGNVRT LEKIDMRECS LSSIPSSAVS LTSLCYVTCY REALWMWKEV 601: EKAVPGLRIE ATEKWFNMTW PDE |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)