AT5G45640.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilase family protein (TAIR:AT5G45650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:18507489..18511616 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82354.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.04 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 754 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKRIFGIFIF LSLLLFLVPL LASCTKEKQL REERASSING FAAELTPDQA SRLKELKEVV SVFKSDPRKY KIHTTRSWEF VGLKEEEGED YRSDGDAPRH 101: KYDVNDRFRV GRKFLKNAKH GDGVIVGLID SGVWPESRSF DDKGMGPIPE SWKGICQTGV AFNSSHCNRY YARGYERYYG PFNAEANKDF LSPRDADGHG 201: SHTASTAVGR RVDGVSALGG IAMGTASGGA SLARLAVYKA CWAVPNKEKY ATNTCFDEDM LAAFDDAIAD GVNVISISIG TVEPHTYLED GIAIGALHAV 301: KRDIVVAASA GNDGPARETL SNPAPWIITV GASSLDRFFV GRLELGDGYV FESDSLTTLK MDNYAPLVYA PDVVVPGVSR NDAMLCLPNA LSPDHVRGKV 401: VLCLRGYGSG STIGKGLEVK RAGGVGMILA NSRDNDAFDV ESHFVPTALV FSSTVDRILD YIYNTYEPVA FIKPAETVLY RNQPEDSVYP YKPAPFMTSF 501: LPDIIAPGLN ILAAWSGADS ASKDSIDRRV LDYNLDSGTS MSCPHVAGAI ALLKSMHPTW SSAAIRSALM TTASMTNEDN EPIQDYDGSP ANPFALGSRH 601: FRPTKAASPG LVYDASYQSY LLYCCSVGLT NLDPTFKCPS RIPPGYNLNY PSISIPYLSG TVTVTRTVTC VGRTGNSTSV YVFNAQPPNG VLVKAEPNVL 701: VFDKIGQKKR FNIIFTTQRY EFTGEARRDR YRFGWFSWTD GHHVVRSSIA VSLV |
||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)