AT5G45105.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.620 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : zinc transporter 8 precursor | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
zinc transporter 8 precursor (ZIP8); FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1290 Blast hits to 1140 proteins in 181 species: Archae - 0; Bacteria - 16; Metazoa - 101; Fungi - 553; Plants - 513; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:18223514..18224946 | ||||||||||||
| Molecular Weight (calculated) | 32366.00 Da | ||||||||||||
| IEP (calculated) | 8.62 | ||||||||||||
| GRAVY (calculated) | 0.37 | ||||||||||||
| Length | 296 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATTTQHMNQ IFLVLLLISF AISPAISTVP KECETDSTDS CIDKTKALPL KIVAIVAILV TSMIGVAAPL FSRYVTFLHP DGKIFMIIKC FASGIILGTG 101: FMHVLPDSFE MLSSPCLEDN PWHKFPFTGF VAMLSGLVTL AIDSIATSLY TKKAVADDSE ERTTPMIIQI DHLPLTTKER SSTCSKQLLR YRVIATVLEL 201: GIIVHSVVIG LSLGATNDTC TIKGLIAALC FHQMFEGMGL GGCILQRLQR QQSNSINHGR TAQCLFCRIA HLYGTCRSSS RRVYGIYAPK KRQASA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)