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AT5G44640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.673
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid
  • PMID:22430844 (2012): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : beta glucosidase 13
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 13 (BGLU13); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 12 (TAIR:AT5G42260.1); Has 11271 Blast hits to 10941 proteins in 1459 species: Archae - 140; Bacteria - 7743; Metazoa - 717; Fungi - 200; Plants - 1456; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G44640-MONOMERCAZy:GH1EC:3.2.1.21eggNOG:COG2723
eggNOG:KOG0626EMBL:AB024024EMBL:BT033043EMBL:CP002688
EnsemblPlants:AT5G44640EnsemblPlants:AT5G44640.1entrez:834493Gene3D:3.20.20.80
GeneID:834493Genevisible:Q9LU02GO:GO:0005794GO:GO:0005975
GO:GO:0008422Gramene:AT5G44640.1hmmpanther:PTHR10353HOGENOM:HOG000088630
InParanoid:Q9LU02InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853
InterPro:IPR033132KEGG:ath:AT5G44640KO:K01188OMA:QIGFGAY
PANTHER:PTHR10353PaxDb:Q9LU02Pfam:PF00232Pfam:Q9LU02
PhylomeDB:Q9LU02PRIDE:Q9LU02PRINTS:PR00131PRO:PR:Q9LU02
PROSITE:PS00653ProteinModelPortal:Q9LU02Proteomes:UP000006548RefSeq:NP_199277.1
scanprosite:PS00653SMR:Q9LU02STRING:3702.AT5G44640.1SUPFAM:SSF51445
TAIR:AT5G44640tair10-symbols:BGLU13TMHMM:TMhelixUniGene:At.50504
UniProt:Q9LU02
Coordinates (TAIR10) chr5:+:18011146..18012669
Molecular Weight (calculated) 56959.70 Da
IEP (calculated) 9.07
GRAVY (calculated) -0.35
Length 507 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTKYFSLLV FIIVLASNEV IAKKHSSTPK LRRSDFPKDF IFGAATSAYQ VEGAAHEDGR GPSIWDTFSE KYPEKIKDGT NGSIASDSYH LYKEDVGLLH
101: QIGFGAYRFS ISWSRILPRG NLKGGINQAG IDYYNNLINE LLSKGIKPFA TIFHWDTPQS LEDAYGGFFG AEIVNDFRDY ADICFKNFGD RVKHWMTLNE
201: PLTVVQQGYV AGVMAPGRCS KFTNPNCTAG NGATEPYIVG HNLILAHGEA VKVYREKYKA SQKGQVGIAL NAGWNLPYTE SAEDRLAAAR AMAFTFDYFM
301: EPLVTGKYPV DMVNNVKDGR LPTFTAKQSK MLKGSYDFIG INYYSSSYAK DVPCSSENVT LFSDPCASVT GEREGVPIGP KAASDWLLIY PKGIRDLLLY
401: AKYKFKDPVM YITENGRDEA STGKIDLKDS ERIDYYAQHL KMVQDAISIG ANVKGFFAWS LLDNFEWATG YSVRFGLVYV DFNDGRKRYP KKSAKWFRKL
501: LSEKKRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)