AT5G44316.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Stabilizer of iron transporter SufD superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Stabilizer of iron transporter SufD superfamily protein; INVOLVED IN: iron-sulfur cluster assembly; CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1 (TAIR:AT4G04770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:17852911..17854521 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53088.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.12 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||
| Length | 470 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASLFAIGFS KFSPQPTSDY SKLLKVFHPK PYSLKFLFLK TLNPTRFFKV RANDGTEPSD KLQQYFQNQD YDKKYGFLEN IDSFTIPKGL SEETIRLISK 101: LKKEPAWILE YRLKAYAKFL KLEEPKWSDN RYPLLDLQDM CFYSAPKKKP TLNSSDIADE ADDPKLLEEF DRLDVPLTKK KKCSPKVAVD AVYNSESIAI 201: TNKEPLEKSG VIFCSISEAI RKYPDLIKKY LGRVVPSDDN YYAALNTAVF SDGSFCYIPK NTRCPMPLSS YFRMNSIENT GQFERTLIVA EEGSFVEYSE 301: GCTAISHDKN QLHAAVVELY CAEGAEIKYS TRGLCAGDRS KISWTQVEKG FAITWKYPSV VLEGDDSVGE AENARNTSTC DSMLIGDNAA ANTYPYIQVK 401: NPSARIEHEA STSKIGEDQI FYFQQRGIDH ERALAAMISG FCRDVFNKLP NEFGAEVNQL LSIKLEGSVG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)