AT5G41300.1
Subcellular Consensus
(Prediction and Experimental) min: ![]() .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Receptor-like protein kinase-related family protein | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Receptor-like protein kinase-related family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT5G41290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:16515004..16516102 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 32476.90 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 6.33 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||
Length | 287 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: METTKKLSPI FCFSSLLCLF FTMNQAVSET DHMDTFCIDS SRNTTGNTTY NKNLNTMLST FRNQSSIVNN YNLTTGLASD TVYGMFLCTG DVNITTCNNC 101: VKNATIEIVK NCTNHREAII YYIDCMVRYS DKFFLSTFEK KPNSIWSGDD PIPKSLGPFK KRLYKKMGEA IVRSSTLSSA LTPYYYLDVT RFDGSYDLDS 201: LVQCSPHLNP ENCTICLEYA LQEIIDCCSD KFWAMIFTPN CFVNYMITTS PLPPLPSPYH HSGSCSIRGN SEIFWGMIIL AALVFTF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)