AT5G40570.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Surfeit locus protein 2 (SURF2) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Surfeit locus protein 2 (SURF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 2 (SURF2) (TAIR:AT5G14440.1); Has 83 Blast hits to 79 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:16246798..16248251 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23717.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.87 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.02 | ||||||||||||||||||||||||||||
| Length | 211 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRIENGL KFSKLVCKLT GDTVNKNEEH 101: IWKHVNGKRF LHKLEQVERG AGSSGRTEET QVNNPRHNKE DSGSEESDFW MPKSSSDSEL DEETDEENCK GSHCDDKESE ELSERTKRMS LEIGPSSFAS 201: RKKKSKNDEL S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)