AT5G39720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.955 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : avirulence induced gene 2 like protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
avirulence induced gene 2 like protein (AIG2L); CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G39730.1); Has 287 Blast hits to 287 proteins in 90 species: Archae - 12; Bacteria - 68; Metazoa - 0; Fungi - 56; Plants - 104; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:15899673..15900517 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 19103.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.35 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||||||||||
| Length | 165 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS 101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)