AT5G39220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.651 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G13820.1); Has 3137 Blast hits to 3135 proteins in 734 species: Archae - 56; Bacteria - 2199; Metazoa - 167; Fungi - 8; Plants - 225; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:15705913..15708039 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36851.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.33 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||
| Length | 330 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMGSLKIISP PPPATRFRQR VTANGDGFPT FLPKEIQNIK DPFARALAQR IVRIPVPLQM GNFRGSVMSS CIKPLVQLHD KSPVVLLHCF DSSCLEWRRT 101: YPLLEQACLE TWAIDVLGWG FSDLEKLPPC DAASKRHHLF ELWKTYIKRP MILVGPSLGA TVAVDFTATY PEAVDKLVLI NANAYSEGTG RLKELPKSIA 201: YAGVKLLKSF PLRLLANVLA FCSSPLSENI DWTNIGRLHC QMPWWEDAMV DFMISGGYNV ASHIKHIDHK TLVVCSENDQ IVSNQLSVKL LCELANAVLR 301: EVPDSGHLPH VENPKHIVKL ISDFASGKLY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)