AT5G38400.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.950 What is SUBAcon? |
|
||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
|
||||||||||||||||
| Coordinates (TAIR10) | chr5:+:15375846..15376301 | ||||||||||||||||
| Molecular Weight (calculated) | 18045.40 Da | ||||||||||||||||
| IEP (calculated) | 9.84 | ||||||||||||||||
| GRAVY (calculated) | -1.13 | ||||||||||||||||
| Length | 151 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHVDSMKRAR VSAVYEGKER NRSSNGEETR REQSKHARMT AKARMNVYKE SMKPLPPKRK KSLMIISLMR KKEDTQDDQN NVTVVEKEKE EKEKGTVQNI 101: RENAEMLSSK CVEEWPHMLT YEEEWTWFAF AFGWGWWQRY DAVMSGKSWF N |
||||||||||||||||
| See Also |
|
||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)