AT5G38260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:15283692..15285837 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71415.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.31 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 638 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MINLSLYQTN SLSYTIIWML FVIPSCVLSV DERQKHCSPT FRCGKQTDLY YPFWSPDREE CGHPVFKVNC SGDFAEFTIS TVKFHVLEMN YESRIIRLVR 101: TEYLNNLCPW HPENRSINQE VLPFLQDTEL GTFYYNCSGP TVDELANGYI RQLGCDEEVG GKSYFVSSPS HPGNRAILDG LSASCERNVD IPVSRSAMET 201: TATNQSLEAI KKVLDVGFEL GFNSDCSLCV ASKGACGFNQ SSKAFVCYCK DEPHEHTCGK MGIGIGLGCG FLGATLITVC LLCFFFQKRR TSHHLRPRDN 301: NLKGLVQLKQ YSYAEVRKIT KLFSHTLGKG GFGTVYGGNL CDGRKVAVKI LKDFKSNGED FINEVASMSQ TSHVNIVSLL GFCYEGSKRA IVYEFLENGS 401: LDQFLSEKKS LNLDVSTLYR IALGVARGLD YLHHGCKTRI VHFDIKPQNI LLDDTFCPKV SDFGLAKLCE KRESILSLLD ARGTIGYIAP EVFSGMYGRV 501: SHKSDVYSYG MLVLEMIGAK NKEIEETAAS NSSSAYFPDW IYKNLENGED TWKFGDEISR EDKEVAKKMT LVGLWCIQPS PLNRPPMNRI VEMMEGSLDV 601: LEVPPKPSIH YSAEPLPQLS SFSEENSIYT EVFIGSTS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)